It has been two and a half years since Naruto Uzumaki left Konohagakure, the Hidden Leaf Village, for intense training following events which fueled his desire to be stronger. Now Akatsuki, the mysterious organization of elite rogue ninja, is closing in on their grand plan which may threaten the safety of the entire shinobi world. Although Naruto is older and sinister events loom on the horizon, he has changed little in personality—still rambunctious and childish—though he is now far more confident and possesses an even greater determination to protect his friends and home. Come whatever may, Naruto will carry on with the fight for what is important to him, even at the expense of his own body, in the continuation of the saga about the boy who wishes to become Hokage. [Written by MAL Rewrite]

The Yomota family is small and typical: father Kinekuni (42), mother Tamiko (38), and son Inumaru (17). One day, a beautiful girl appears at their front door, calling herself "Maroko Yomota," granddaughter of Inumaru who travels back in time with a time machine to visit her ancestors. Even with Tamiko's strong objection, Kinekuni and Inumaru welcome her to stay with them, and the structure of a happy family has begun to collapse.

Aside from her deep passion for eating cakes, the clumsy Ichigo Amano has never been successful at anything. After an encounter with Henri Lucas, a famous patissier, Ichigo's amazing tasting abilities—although unbeknownst to her—are discovered. Recognizing her talent, Henri offers her the chance to attend St. Marie Academy, a prestigious culinary school which specializes in desserts. In spite of the fact that she is a beginner lacking skills, thanks to Henri's recommendation, Ichigo is placed in the topmost group with the "Sweets Princes." The princes, famous throughout the school for their magical treats, are Sennosuke Andou, an expert in traditional Japanese sweets; Satsuki Hanabusa, with a flair for candied flowers; and Makoto Kashino, a gifted chocolatier. Ichigo and the Sweets Princes, each accompanied by their "Sweets Spirits"—fairies who make patissiers' dreams come true—all work towards their goals in the competitive world of sweets.

Upon her return to Japan after a two year study break in Paris, Ichigo Amano is met with news of Team Ichigo's separation, as each of the Sweets Princes takes a different path toward their dream. Now in her first year of high school, Henri Lucas has a project in store for her, enlisting the help of Ichigo, Makoto Kashino, and new members Lemon Yamagishi and Johnny McBeal to give rise to a new Team Ichigo. As the four work together on this project, Ichigo and Makoto continue to grow closer, though Johnny and the unrelenting Miya Koshiro will not idly sit by; with Johnny's eye on Ichigo and Miya still after Makoto, it definitely seems like love won't come easily. With Ichigo's time at St. Marie Academy, she is now ever closer to her dream of starting her very own pâtisserie. However, she will soon realize that it takes more than just making delicious sweets to open up a shop.